Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data - grunwaldlab/metacoder
We’ve released the newest version of Nimble on CRAN and on our website. Version 0.6-9 is primarily a maintenance release with various bug fixes and fixes for CRAN packaging issues. root@rockpro64:/home/chiefio# apt-get install r-base Reading package lists Done Building dependency tree Reading state information Done The following additional packages will be installed: libpaper-utils r-base-core r-cran-boot r-cran… Dirk Eddelbuettel, R, C++, Rcpp Only those tuples are returned which are not dominated by any other tuple. A tuple dominates another tuple if it is better in all relevant dimensions and strictly better in at least one dimension. R package for Convolution of Gamma Distributions. Contribute to ChaoranHu/coga development by creating an account on GitHub.
But, all packages submitted to CRAN (or Bioconductor) must follow specific guidelines, including the folder structure of the package and the other files like Description, Namespace and so on. As of 2018-01-22, there were 12,126 active packages on the Comprehensive R Archive Network (CRAN). Just over a year earlier, 2017-01-07, John Nash[1] noted “There are now over 9000 packages on CRAN, with many more in Bioconductor, on Github… R-package: Calculation of haplotype blocks and libraries - tpook92/HaploBlocker An R-package for specification, simulation and likelihood calculation of phylogenetic comparative models - venelin/PCMBase An Elasticsearch client tailored to data science workflows. - uptake/uptasticsearch R Package: Combine Categories Using Greenacre's Method - JeffJetton/greenclust glmmTMB. Contribute to glmmTMB/glmmTMB development by creating an account on GitHub.
You will need the most current version of R and, preferably, RStudio loaded on your to a set of commands that are not available in the base R set of functions. Packages download from specific CRAN "mirrors"" where the packages are Download Packages from CRAN-like Repositories character vector of the names of packages whose latest available versions If a repository is local, i.e.the URL starts with "file:" , then the packages are not downloaded but used directly. update.packages(lib.loc = .lib.loc, CRAN = options("CRAN"), contriburl of the short names of packages whose current versions should be downloaded from CRAN . If CRAN is local, i.e., the URL starts with "file:" , then the packages are not The CRAN maintainers will typically look at this very closely on So make sure it's something that's likely to be around for a while, and that it's not heavily filtered. install packages, quit R, send information over the internet, The policy suggests a new version once every 1-2 months at most. Compare Installed Packages with CRAN-like Repositories later version on the repositories whereas update.packages offers to download and install such packages. new.packages looks for (suitable) packages on the repositories that are not
From the R command line (e.g. in R-Studio), install the RGtk2 package by running: install.packages("RGtk2", depen=T) This might fail with the warning that package ‘RGtk2’ is not available (for R version xxx) if your version of R has been…
Conda recipes for the bioconda channel. Contribute to bioconda/bioconda-recipes development by creating an account on GitHub. Aggregate repository for the R infrastructure. Contribute to AnacondaRecipes/aggregateR development by creating an account on GitHub. From short reads to differential expression. Contribute to MWSchmid/RNAseq_protocol development by creating an account on GitHub. Version 1.0.0 and newer requires C++ development tools in order to install from source. The steps required to install the appropriate development tools varies by operating system and is beyond the scope of this document. Note: The first way need your computer have development tools, but can help you follow the newest version from my github.